Gozo & Comino Islands: Blue/ Crystal Lagoons Caves Half Day Tour

Travelers seeking a quick but impactful way to experience Malta’s breathtaking coastlines and hidden gems will find this half-day boat tour to be a real gem. Designed for those who want a taste of the Mediterranean’s best without spending the entire day on the water, this cruise offers a well-balanced mix of natural beauty, comfort, and authentic adventure.

What we love about this experience: it’s small enough to feel personal, the boat’s ability to access caves and narrow passages is a major plus, and the stops at iconic spots like the Blue Lagoon and Crystal Lagoon are truly unforgettable. However, one thing to consider is that the tour’s timing means you’ll want to plan ahead, especially with the new regulations requiring a pre-booked QR code for the Blue Lagoon from May 2025.

This tour is ideal for travelers who enjoy scenic boat rides, snorkeling, and exploring lesser-known corners of Malta’s beautiful islands. It suits those who prefer a flexible, relaxed schedule without sacrificing the chance to see some of Malta’s most photographed spots.

Key Points

• Small boat advantage: Easier access to caves and narrow passages, providing intimate exploration.
• Diverse stops: From tranquil lagoons to rugged coastlines, each location offers unique photo opportunities.
• Pre-booking requirement: From May 2025, a QR code for Blue Lagoon entry is mandatory, so plan your slots in advance.
• Value for money: At just over $36, the tour includes multiple stops, snorkeling gear, and commentary.
• Authentic experience: The knowledgeable crew and small group size create a friendly, personalized atmosphere.
• Weather-dependent: The tour relies on good weather; cancellations or changes may occur in poor conditions.

The Itinerary: What to Expect on Your 4-Hour Adventure

Departure and Initial Journey

Starting from Mellieha, the tour kicks off with a scenic cruise on a smaller, nimble boat that can navigate tight caves and narrow channels—something larger ships can’t do. This means you’ll get closer to Malta’s rugged coastline, feeling like a true explorer rather than just a tourist on a crowded vessel.

Exploring Comino’s Caves and Coastline

One of the highlights is entering the sea caves—a favorite among reviewers who appreciated the up-close view of the rocky formations. “The guide relayed the story really well,” a traveler noted, highlighting how the crew enhanced the experience with interesting insights. You might find yourself in awe of Elephant Head Rock, a natural formation that resembles an elephant’s head, and other geological marvels that make Malta’s coastline so distinctive.

Crystal Lagoon Stop

After a scenic cruise, you’ll stop at the Crystal Lagoon for about 30 minutes. This peaceful stretch of water is perfect for swimming, relaxing, or just snapping photos of the calm, turquoise waters. Reviewers raved about the peaceful atmosphere and the opportunity to cool off in clear waters—ideal for families or anyone wanting a tranquil break.

Blue Lagoon Experience

The Blue Lagoon is the star attraction, famous for its impossibly clear waters and stunning backdrop. Visitors have praised the 1-hour stop, noting how the gentle waves make it an ideal spot for swimming and snorkeling. Be aware that, as of May 2025, to set foot on the lagoon, you’ll need to have booked a free QR code in advance, making pre-planning essential. If you prefer to stay on the boat, no QR code is necessary.

Gozo and St. Marija Bay

On the way back, the boat heads toward Gozo Harbour, offering views of a traditional fishing village that feels like stepping into a different time. The final stop at St. Marija Bay is a secluded, unspoiled beach—perfect for a leisurely walk or simply soaking in the scenery.

Return Journey

As the cruise winds down, you’ll pass St. Nicholas Bay and Sea Caves, enjoying panoramic views of the Mediterranean coastline. Reviewers appreciated the relaxing atmosphere onboard, noting that the cruise felt just the right length for a short escape.

What’s Included and What’s Not

Included:

• Full cruise of Comino, with stops at key sights like Crystal Lagoon and Blue Lagoon.
• Snorkeling masks (refundable deposit) and floating noodles—great for those who want to dip their toes in the water.
• Toilet facilities onboard, ensuring comfort during your 4-hour adventure.
• Scenic views of Gozitan and Maltese coastlines, along with sea caves and iconic rock formations.

Not Included:

• Food and drinks (though you can purchase them onboard).
• The Blue Lagoon QR ticket must be booked separately in advance—crucial for landing at the Lagoon itself.
• Over-sized luggage or unfoldable strollers are not permitted, so pack light.

Practical Tips for Your Trip

• Book early: On average, this tour is booked about 29 days in advance, which makes sense given its popularity.
• Plan for the QR code: From May 2025, securing your Blue Lagoon entry involves pre-booking your free QR code online.
• Bring essentials: Snorkelings masks, sunglasses, sunscreen, and a hat will make your experience more comfortable.
• Stay flexible: If you want to stay on the boat while at the Blue Lagoon, you can, but the view from the water is stunning enough to make this a tough choice.
• Group size: Limited to 24 travelers, ensuring a more intimate experience and better interaction with the crew.
• Weather: Good weather is key—if conditions turn poor, the tour may be canceled or rescheduled.

Authentic Experiences and Review Insights

Multiple reviews highlight the knowledgeable guides and crew, making the trip more engaging and informative. “The captain was exceptional, making sure everyone was safe and had a good time,” one traveler shared. This personal touch elevates what might otherwise be a standard boat ride.

Reviewers also noted the spectacular views and caves as highlights—”more than worth the money” was a common sentiment. Many appreciated the timing and length of the tour, feeling it was a perfect balance between sightseeing and relaxation, especially since it’s just four hours.

One guest mentioned the peacefulness of the lagoon, while another appreciated the chance to snorkel with a refundable deposit, adding an active element to the trip. The tour offers good value—combining scenery, cultural interest, and fun water activities—all in a manageable timeframe.

Who Will Love This Tour?

This trip is best suited for travelers who want a compact, scenic adventure without the hassle of full-day excursions. It’s ideal for families, couples, or groups who want to see Malta’s coast from a different perspective, with plenty of opportunities for swimming and photos.

If you’re a nature lover or enjoy small-group experiences, this cruise offers a friendly, personal atmosphere. Those with mobility issues might find the tour less accessible, and over-sized luggage isn’t allowed, so pack accordingly.

Final Thoughts

The Gozo & Comino Islands: Blue/Crystal Lagoons Caves Half Day Tour delivers a beautiful slice of Malta’s coastline in just four hours. It combines stunning scenery, knowledgeable crew, and flexible options that cater to different preferences—whether you want to swim, relax, or explore caves.

Good value, well-organized, and highly praised, this experience is perfect for anyone seeking a short but memorable Mediterranean escape. Just remember to plan ahead for Blue Lagoon entry, dress comfortably, and bring your sense of adventure.

FAQs

Do I need to book a ticket for Blue Lagoon?
Yes, from May 2025 onward, a free QR code for Blue Lagoon entry must be booked in advance online. If you prefer to stay on the boat while at the Lagoon, you do not need a QR code.

How long is the tour?
The entire cruise lasts approximately 4 hours, including stops at Crystal Lagoon, Blue Lagoon, and St. Marija Bay.

Can I snorkel during the tour?
Yes, snorkeling masks are provided (with a refundable deposit), and the calm waters of the lagoons are perfect for exploring underwater.

Is this tour suitable for children or people with mobility issues?
Most travelers can participate, but it’s not recommended for those with mobility impairments due to the nature of the boat and access.

What should I bring?
Bring sunscreen, a hat, swimwear, a towel, and possibly waterproof cameras or phones. Food and drinks are available for purchase onboard.

What if the weather is bad?
The tour is weather-dependent. Poor conditions might lead to cancellation or rescheduling, and you’ll be offered a different date or full refund.

This trip offers a wonderful balance of adventure, relaxation, and stunning scenery—an excellent choice for anyone looking to make the most of Malta’s coastal highlights without the full-day commitment.