Comino is one of Malta’s best-kept secrets for boat lovers. Its crystal-clear waters, dramatic cliffs, and countless caves make it a perfect place for cruises and boat tours. Whether you want a relaxing day lounging in the Blue Lagoon or an adrenaline-pumping ride around rugged coastlines, Comino offers something for every type of traveler. We particularly like the Sunset Cruise to the Blue Lagoon, which combines stunning scenery with a laid-back vibe, and the private yacht charters that allow you to customize a perfect day at sea.
If you’re eager for a tailored experience or a more social atmosphere, many tours include snorkeling, swimming, and visits to iconic sights like Santa Marija Tower or Elephant Rock. For a comprehensive look at what’s available, check out our list below of the best cruises and boat tours in Comino.
1. Malta: Sunset Cruise to the Blue Lagoon
This popular sunset cruise from Bugibba Jetty offers a relaxed three-and-a-half-hour trip where you can swim, snorkel, and enjoy the Blue Lagoon’s famous turquoise waters. What makes this tour stand out is the opportunity to marvel at a spectacular sunset over Comino while sipping drinks from the full-service bar. The onboard atmosphere is fun, with good music and comfortable deck chairs for lounging. Kids and adults alike love sliding into the water from the 10-meter slide, making it a lively yet chill experience.
The tour includes scenic views past Malta’s northern beaches and caves, with plenty of opportunities for photos, especially as the day winds down. You’ll appreciate the balance of sightseeing, swimming, and relaxing, making it one of the best value options at only $31 per person. Reviewers consistently rate it highly (4.7/5 from over 1,000 reviews), praising its friendly vibe and stunning scenery.
Bottom Line: Ideal for those looking for a relaxed, scenic evening with options for swimming, snorkeling, and enjoying a lively atmosphere at sunset.
2. From Malta: Gozo Quad Bike Tour + Comino Boat Tour and Lunch
At number 2, this full-day adventure combines the thrill of exploring Gozo on a guided quad bike tour with a scenic boat trip around Comino. For around $136, your day includes a delicious Gozitan lunch, plus stops at the Sannap Cliffs and Salt Pans for photos and sightseeing. The highlight for many is the Blue Lagoon swim during summer, which offers a perfect break from land-based exploration.
What makes this tour unique is the mix of high-energy riding through Gozo’s countryside with the calm beauty of the coastal waters around Comino. The tour is well-reviewed (4.7/5 from 869 reviews), especially for its knowledgeable guides and the variety of experiences—quad biking, sightseeing, and swimming. The itinerary is flexible, allowing you to customize your day with options like visits to caves and beaches.
Bottom Line: Best suited for active travelers who want a full-day, multi-sensory experience combining land and sea adventures.
3. SerenityBoatChartersMalta: Bluelagoon, Comino & Gozo boat trip
This private boat trip combines exclusivity with flexibility, offering a 2 to 4-hour tour tailored to your interests. For $190, up to 7 people can explore the Blue Lagoon, Crystal Lagoon, sea caves, and Santa Marija Tower with a personalized itinerary. The private nature of this tour means you get to choose whether to snorkel, relax, or explore caves, all aboard a modern boat.
What sets this experience apart is the ability to avoid crowded spots and explore lesser-known areas like the Crystal Lagoon, which is less visited but equally stunning. The host is attentive and knowledgeable, making this the perfect choice for travelers seeking a more intimate, customizable experience. Reviewers highlight the scenic beauty and the flexibility that makes this trip special.
Bottom Line: Ideal for groups or families wanting a private, customizable boat tour with a focus on snorkeling and scenic exploration.
4. Malta: Blue Lagoon, Caves, Comino & Gozo Private Boat Trip
At number 4, this private boat trip offers a tailored exploration of Comino’s most famous sights, including the Blue Lagoon, Crystal Lagoon, and numerous caves. Starting from Elephant Rock, the tour is designed for those who want a personalized experience, with the option to visit caves, relax on beaches, or snorkel in crystal waters.
What makes this tour stand out is the customizable itinerary — you work with your captain to focus on what interests you most. The private setting ensures you won’t be crowded and can enjoy the scenery at your own pace. The experience typically lasts between 2 and 4 hours, making it flexible for different schedules. Reviews are excellent, with a 5/5 rating from five travelers, praising the dedicated attention and scenic stops.
Bottom Line: Best for travelers who prefer a private, flexible experience and want to explore Comino’s caves and beaches without the crowds.
5. From Sliema: Private Comino and Gozo Boat Charter
This private 7-hour cruise from Sliema offers the ultimate bespoke experience. You’ll visit both Comino and Gozo, with stops at the Blue and Crystal Lagoons, where you can swim or relax. The captain works with you to create an itinerary that suits your interests, whether that’s exploring caves, taking photos, or simply sunbathing.
The tour is perfect for those who want privacy and flexibility, with the added convenience of a private transfer from Sliema. The boat is equipped for comfort and fun, with music and plenty of space to lounge. While it doesn’t have reviews listed in the data, private charters generally provide a premium experience for groups seeking exclusivity.
Bottom Line: Great for groups or couples wanting a full-day, private exploration of Malta’s coastal highlights.
6. Private Yacht Charters around Comino & Blue Lagoon
For those seeking a luxurious experience, this 4-hour private yacht charter puts you aboard a classic pleasure yacht with space for up to 12 travelers. Snorkel around Comino’s best spots like St Nicholas Bay or St Mary Bay, and enjoy the privacy to relax at your own pace.
What differentiates this tour is the high-end comfort and the focus on exploring Comino’s coast without any crowds. The yacht includes amenities such as a Bluetooth sound system, making your day at sea both fun and sophisticated. Though reviews are limited, it’s clear this tour caters to travelers who value privacy and a high level of service.
Bottom Line: Ideal for couples or small groups wanting a private, upscale day at sea with snorkeling and scenic exploration.
7. Malta, Comino, Blue Lagoon & Crystal Lagoon: 4-hour Cruise
This half-day cruise is a solid choice for those on a tight schedule. It covers the most famous sights: the Blue Lagoon, Crystal Lagoon, and Santa Maria Caves. Starting at Cirkewwa, the cruise includes multiple stops for swimming and snorkeling, with a total duration of just four hours.
What makes this tour appealing is the balance of sightseeing and activity. The itinerary includes visits to three major spots with enough time to relax or explore. It’s priced at $41 per person and offers good value, especially for travelers who want a quick but comprehensive experience.
Bottom Line: Perfect for travelers short on time but eager to see Malta’s best coastal spots.
8. Malta Private Boat: Blue Lagoon, Comino and Sea Caves
This private dinghy tour around Comino provides an intimate experience at a competitive price—$181 for up to 12 people. You’ll explore popular sites like Sea Caves and Elephant Rock at your own pace, with the captain guiding the trip based on your preferences.
The highlight is the personalized nature of this tour, perfect for small groups or families. The private boat allows you to visit less crowded caves, snorkel in secluded spots, and enjoy a peaceful day at sea.
Bottom Line: Suited for those wishing for exclusivity and flexibility, with the ability to customize your itinerary.
9. From Sliema: Comino & Blue Lagoon tour with Boat Ride
Starting from Sliema, this 7-hour tour combines a scenic boat ride with guided walks and swimming. It includes a bus transfer to the boat, making logistics simple. The highlight is the ample free time in the Blue Lagoon—about 2.5 hours—to swim, relax, or explore.
The tour features a short hike through Comino’s natural beauty, giving a taste of the island’s scenery beyond the beaches. It’s a good choice for travelers who want an organized day with some activity and plenty of time in the water.
Bottom Line: Best for those who want a guided experience with a balance of sightseeing, swimming, and easy logistics.
10. Gozo: Private Boat Tour to Comino with Swim Stops
This private 3-hour tour from Gozo allows you to explore Comino’s waters with a personal skipper. Highlights include swimming at the Blue Lagoon and Crystal Lagoon, plus visits to caves and the lesser-known Crystal Cave.
The personalized nature makes it ideal for families or couples who want a flexible, relaxed day at sea. The route is customizable, and the boat is equipped for comfort and fun. Reviews are positive, emphasizing the personal attention and scenic stops.
Bottom Line: Perfect for those staying in Gozo who want a private, flexible boat experience around Comino.
11. Malta: Blue Lagoon, Comino, and Gozo Boat Tour
This half-day boat tour offers a quick but thorough exploration of Malta’s coast, with a focus on swimming in the Blue Lagoon and visiting caves. It’s designed for a small group of up to 10, with a sleek motorboat that has amenities like a sunshade and freshwater shower. It hits all the major spots including Elephant Rock and the famous caves.
The personalized small-group setting means more time for swimming and relaxing. The tour lasts around 4 hours, making it a great half-day option. Its high review rating (5/5) shows it’s a favorite among travelers.
Bottom Line: Excellent for travelers wanting a quick, intimate, and scenic boat experience.
12. Private Boat Charter Rio 44 Full/half day Private Cruises
Finally, this luxury private yacht offers full or half-day cruises with up to 25 passengers. It includes snorkeling in St Nicholas Bay and Santa Maria Bay, visiting the Blue Lagoon, and even a stop in Gozo. The experience is all about comfort, with music and crew included, making it perfect for celebrations or special occasions.
While reviews are limited, the focus on luxury and privacy makes it ideal for groups seeking an upscale experience. The itinerary can include sunset cruises, round trips, or custom routes—whatever suits your mood.
Bottom Line: Suited for groups wanting a premium, private sea adventure with lots of options for exploring Malta’s coast.
How to Choose Your Perfect Comino Boat Tour
When selecting a boat tour in Comino, consider your budget, the type of experience you want, and how much time you have. For a romantic sunset, the Malta: Sunset Cruise to the Blue Lagoon offers breathtaking views. If you prefer a private, customized day, the private yacht or boat charters are excellent.
Active travelers might enjoy the Gozo Quad Bike Tour + Comino Boat Tour, while those seeking a quick overview might opt for the 4-hour cruise. Think about whether you want a shared experience, private time, or luxury amenities.
Booking early is advisable during peak summer months, especially for private charters or popular tours, to secure your preferred schedule.
In summary, Comino’s boat tours range from lively group cruises to intimate private adventures. If you’re after a relaxing sunset or a private day exploring caves and lagoons, there’s an option for you. For those on a budget, the Blue Lagoon sunset cruise offers fantastic value, while luxury seekers can indulge in private yacht charters. No matter your choice, booking ahead ensures a smooth, memorable trip on Malta’s stunning waters.